SCCmec: Staphylococcus mec cassette typing online
Upload a genomic Staphylococcus aureus isolate and get access to SCCmec type
No registration required • Your data stays secure & private
No credit card required • Your data stays private & secure
Solu: genomic surveillance in your browser
Ready in Minutes
The tool runs in our optimized high performance cloud, taking usually from seconds to minutes to complete.
Works for Bacteria and Fungi
Solu supports most pathogenic bacterial and fungal organisms.
Easy-to-use Tool
You can use Solu even if you have never analyzed WGS data before thanks to its simple interface.
HIPAA-grade Security
Your uploaded files are protected with the high-level security, so no one can access them except you.
Fully Online
Solu is online which means that you don't need to download anything to your computer or phone.
Supports Short & Long Reads
Solu Platform supports both short- and long-read sequencing data.
How to run SCCmec on Solu Platform
Looking for an easy way to perform SCCmec typinhg for your MRSA sample without downloading complex software and databases? Solu Platform provides a SCCmec report for your sample directly in your browser. Upload a nucleotide sequence file in .fasta, .fna, .faa or.gz format and get access to the results in just minutes.
REQUIREMENTS
WGS data from Staphylococcus aureus isolates
Inputs
raw reads (.fastq / fastq.gz), genomes (.fasta)
Outputs
SCCmec standard output
"Working with Solu has been a joy. The software is intuitive and easy to use, and the team is responsive and proactive."
Prof. Paul Bollyky
Stanford